Antigen

Antigen Class

TFs and others

Antigen

PAPOLG

Cell type

Cell type Class

Uterus

Cell type

HeLa

Primary Tissue

Cervix

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

HeLa cells

cell line

HeLa

treatment

shRNA ZFC3H1

passages

10-25

chip antibody

anti-PAPgamma (Bethyl A301-427A)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP experiments were performed in SupT1 T-ALL cells using the ChIP IP High Sensitivity (Active Motif 53040). ChIP-seq libraries were constructed using the Next Gen DNA Library Kit (Active Motif 53216 and 53264).

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

25246038

Reads aligned (%)

96.3

Duplicates removed (%)

10.8

Number of peaks

1124 (qval < 1E-05)

hg19

Number of total reads

25246038

Reads aligned (%)

95.4

Duplicates removed (%)

12.4

Number of peaks

1126 (qval < 1E-05)